Cytoscape Desktop MCP

Name: Cytoscape Desktop MCP
Author: cytoscape

Drive a running Cytoscape Desktop to load, lay out, and style biological networks.

by cytoscape(0) 0 installs

Free

Free account. Installing gives you the manifest plus copy-paste snippets.

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About

Imported from the official MCP registry - entry io.github.cytoscape/cytoscape-desktop-mcp-bridge v1.0.3. Ratings and installs below are from this marketplace.

Cytoscape Desktop MCP

Drive a running Cytoscape Desktop to load, lay out, and style biological networks.

Packages

mcpb: https://github.com/cytoscape/cytoscape-desktop-mcp/releases/download/mcpb-v1.0.3/cytoscape-mcp.mcpb
npm: @cytoscape/cytoscape-desktop-mcp-bridge @ 1.0.3

Source: https://github.com/cytoscape/cytoscape-desktop-mcp

Registry entry: io.github.cytoscape/cytoscape-desktop-mcp-bridge

Use it

Copy one of these into your project. Installing also returns the manifest and these snippets.

# after Install: the listing is in your workspace's routing pool - nothing else to configure
curl -s -X POST https://api.opensmartroute.ai/api/v1/route -H 'Authorization: Bearer $OSR_API_KEY' -H 'Content-Type: application/json' -d '{"text": "...", "plan": true}'
# or pin it on the OpenAI-compatible endpoint: {"model": "mcp-io-github-cytoscape-cytoscape-desktop-mcp-bridge", ...}

Manifest

An Open Capability Manifest: the router reads it to know what this does, what it costs and when to pick it.

mcp-io-github-cytoscape-cytoscape-desktop-mcp-bridge.ocm.jsonjson

{
  "ocm": "1",
  "id": "mcp-io-github-cytoscape-cytoscape-desktop-mcp-bridge",
  "kind": "tool",
  "name": "Cytoscape Desktop MCP",
  "description": "Drive a running Cytoscape Desktop to load, lay out, and style biological networks.",
  "publisher": "cytoscape",
  "version": "1.0.3",
  "capabilities": {
    "domains": [
      "general"
    ],
    "tags": [
      "mcp",
      "mcp-server",
      "mcpb",
      "npm",
      "mcp-registry"
    ],
    "languages": [
      "en"
    ]
  },
  "quality_prior": 0.6,
  "examples": [
    "Drive a running Cytoscape Desktop to load, lay out, and style biological networks."
  ],
  "primary": false,
  "metadata": {
    "source": {
      "provider": "mcp-registry",
      "repository": "https://github.com/cytoscape/cytoscape-desktop-mcp",
      "path": "server.json",
      "ref": "1.0.3",
      "url": "https://github.com/cytoscape/cytoscape-desktop-mcp",
      "key": "io.github.cytoscape/cytoscape-desktop-mcp-bridge",
      "registry": "https://registry.modelcontextprotocol.io"
    }
  }
}

Fetch it by URL: GET /api/v1/registry/mcp-io-github-cytoscape-cytoscape-desktop-mcp-bridge/manifest?version=1.0.3

About

Cytoscape Desktop MCP

Packages

Use it

Manifest

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