Imported from rossoctl/cortex (.claude/skills/orchestrate:scan/SKILL.md). Install upstream with npx skills add rossoctl/cortex --skill orchestrate:scan. Copyright stays with the author.

flowchart TD
    START(["/orchestrate:scan"]) --> TECH["Detect tech stack"]:::orch
    TECH --> CI["Check CI maturity"]:::orch
    CI --> SEC_SCAN["Check security scanning"]:::orch
    SEC_SCAN --> DEPS["Check dependency management"]:::orch
    DEPS --> TESTS["Check test coverage"]:::orch
    TESTS --> SUPPLY["Check supply chain health"]:::orch
    SUPPLY --> CVE["Run cve:scan"]:::cve
    CVE --> SEC_GOV["Check security governance"]:::orch
    SEC_GOV --> CLAUDE["Check Claude Code readiness"]:::orch
    CLAUDE --> REPORT["Generate scan report"]:::orch
    REPORT --> DONE([Scan complete])

    classDef orch fill:#FF9800,stroke:#333,color:white
    classDef cve fill:#D32F2F,stroke:#333,color:white

Follow this diagram as the workflow.

Orchestrate: Scan

Name: orchestrate:scan
Author: rossoctl

Assess a target repository's current state to determine what orchestration phases are needed. This is Phase 0 — produces artifacts only, no PRs.

When to Use

First step when orchestrating a new repo
Re-run after major changes to reassess gaps
Before running orchestrate:plan

Prerequisites

Target repo cloned into .repos/<target>/:

git clone git@github.com:org/repo.git .repos/<target>

Technology Detection

Check for marker files to identify the tech stack:

ls .repos/<target>/go.mod .repos/<target>/pyproject.toml .repos/<target>/package.json .repos/<target>/Cargo.toml .repos/<target>/requirements.yml 2>/dev/null

Marker	Language	Lint Tool	Test Tool	Build Tool
`go.mod`	Go	golangci-lint	go test	go build
`pyproject.toml`	Python	ruff	pytest	uv build
`package.json`	Node.js	eslint	jest/vitest	npm build
`Cargo.toml`	Rust	clippy	cargo test	cargo build
`requirements.yml`	Ansible	ansible-lint	molecule	—

For multi-language repos (e.g., Go + Python + Helm), note all detected stacks.

Also check for:

Dockerfiles: find .repos/<target> -name "Dockerfile*" -type f
Helm charts: find .repos/<target> -name "Chart.yaml" -type f
Shell scripts: find .repos/<target> -name "*.sh" -type f
Makefiles: ls .repos/<target>/Makefile

Scan Checks

CI Status

ls .repos/<target>/.github/workflows/ 2>/dev/null

For each workflow found, read it and categorize:

Category	What to Check
Lint	Does a workflow run linters? Which ones?
Test	Does a workflow run tests? Are they commented out?
Build	Does a workflow build artifacts/images?
Security	Does a workflow run security scans?
Release	Does a workflow handle releases/tags?

Security Scanning Coverage

Check which security tools are configured in CI:

Tool	How to Detect	Purpose
Trivy	`trivy-action` in workflows	Filesystem/container/IaC scanning
CodeQL	`codeql-action` in workflows	SAST for supported languages
Bandit	`bandit` in workflows or pre-commit	Python SAST
gosec	`gosec` in workflows	Go SAST
Hadolint	`hadolint` in workflows or pre-commit	Dockerfile linting
Shellcheck	`shellcheck` in workflows or pre-commit	Shell script linting
Dependency review	`dependency-review-action` in workflows	PR dependency audit
Scorecard	`scorecard-action` in workflows	OpenSSF supply chain
Gitleaks	`gitleaks` in workflows or pre-commit	Secret detection

Score: count how many of the applicable tools are present vs expected.

Dependency Management

cat .repos/<target>/.github/dependabot.yml 2>/dev/null || echo "MISSING"

Check which ecosystems are covered vs what's in the repo:

In Repo	Expected Ecosystem	Covered?
`pyproject.toml`	pip	?
`go.mod`	gomod	?
`package.json`	npm	?
`Dockerfile`	docker	?
`.github/workflows/`	github-actions	?

Action Pinning Compliance

grep -r "uses:" .repos/<target>/.github/workflows/ 2>/dev/null | grep -v "@[a-f0-9]\{40\}" | head -20

Count actions pinned to SHA vs tag-only. Report compliance percentage.

Permissions Model

Check workflow files for:

Top-level permissions: {} or permissions: read-all (good)
Per-job permissions: blocks (good)
No permissions declaration (bad — gets full default token permissions)

grep -l "^permissions:" .repos/<target>/.github/workflows/*.yml 2>/dev/null

Test Coverage

Categorize tests into 4 areas. For each, detect frameworks, count files/functions, check coverage tooling, and verify CI execution.

Backend Tests

Detect framework from marker files:

# Python
grep -q "pytest" .repos/<target>/pyproject.toml 2>/dev/null && echo "pytest"
# Go
ls .repos/<target>/go.mod 2>/dev/null && echo "go test"
# Go + Ginkgo
grep -q "ginkgo" .repos/<target>/go.mod 2>/dev/null && echo "ginkgo"

Count test files and functions:

find .repos/<target> -type f -name "test_*.py" -o -name "*_test.py" 2>/dev/null | wc -l
find .repos/<target> -type f -name "*_test.go" 2>/dev/null | wc -l
grep -rc "def test_\|func Test" .repos/<target> --include="*.py" --include="*.go" 2>/dev/null | awk -F: '{s+=$2} END {print s}'

Check coverage tooling:

# Python: pytest-cov in dependencies
grep -q "pytest-cov" .repos/<target>/pyproject.toml 2>/dev/null && echo "pytest-cov found"
# Python: coverage config
grep -q "\[tool.coverage" .repos/<target>/pyproject.toml 2>/dev/null && echo "coverage config found"
# Go: -coverprofile in Makefile or CI
grep -r "\-coverprofile" .repos/<target>/Makefile .repos/<target>/.github/workflows/ 2>/dev/null

When coverage tooling is missing, recommend the appropriate tool:

Python: add pytest-cov>=4.0 to dev deps and [tool.coverage.run] source = ["src"] to pyproject.toml
Go: add -coverprofile=coverage.out to go test invocation in Makefile/CI

UI Tests

Detect framework from package.json:

grep -E "playwright|jest|vitest" .repos/<target>/*/package.json .repos/<target>/package.json 2>/dev/null

Count spec files and test blocks:

find .repos/<target> -type f \( -name "*.spec.ts" -o -name "*.spec.tsx" -o -name "*.test.ts" -o -name "*.test.tsx" \) 2>/dev/null | wc -l
grep -rc "test(\|it(\|describe(" .repos/<target> --include="*.spec.*" --include="*.test.*" 2>/dev/null | awk -F: '{s+=$2} END {print s}'

Note: for Playwright E2E-style UI tests, code coverage is typically not applicable. For unit-test-style UI tests (jest/vitest), check for istanbul/c8 coverage config.

E2E Tests

Count test files and functions:

find .repos/<target> -path "*/e2e/*" -type f -name "test_*.py" 2>/dev/null | wc -l
grep -rc "def test_" .repos/<target>/*/tests/e2e/ .repos/<target>/tests/e2e/ 2>/dev/null | awk -F: '{s+=$2} END {print s}'

Build a feature coverage map by scanning test filenames and imports:

# List E2E test files to identify which features are covered
find .repos/<target> -path "*/e2e/*" -name "test_*.py" -exec basename {} \; 2>/dev/null | sort

Map each test file to a platform feature (e.g., test_keycloak.py → Keycloak auth, test_shipwright_build.py → Shipwright builds). Identify features present in the codebase that lack E2E tests.

Build a CI trigger matrix:

# Which workflows run E2E tests, on which triggers and platforms?
grep -l "e2e\|E2E" .repos/<target>/.github/workflows/*.yml 2>/dev/null

For each E2E workflow, note the trigger events (push/PR/manual) and target platforms (Kind/OCP/HyperShift).

Infra Tests

Infra testing is about variant coverage, not code coverage. Score as a variant matrix.

Scan for deployment targets:

# Which platforms appear in CI workflows and scripts?
grep -rl "kind\|Kind\|KIND" .repos/<target>/.github/workflows/ 2>/dev/null
grep -rl "openshift\|OpenShift\|OCP" .repos/<target>/.github/workflows/ 2>/dev/null
grep -rl "hypershift\|HyperShift" .repos/<target>/.github/workflows/ 2>/dev/null

Scan values files for toggle combos:

# Which feature toggles exist in Helm values files?
find .repos/<target> -path "*/envs/*" -name "values*.yaml" 2>/dev/null
# Check for toggle patterns
grep -r "enabled:" .repos/<target>/deployments/envs/ .repos/<target>/charts/*/values.yaml 2>/dev/null | head -20

Check static validation in CI:

grep -rl "helm lint\|helm template" .repos/<target>/.github/workflows/ 2>/dev/null && echo "helm lint: in CI"
grep -rl "shellcheck" .repos/<target>/.github/workflows/ .repos/<target>/.pre-commit-config.yaml 2>/dev/null && echo "shellcheck: in CI"
grep -rl "hadolint" .repos/<target>/.github/workflows/ .repos/<target>/.pre-commit-config.yaml 2>/dev/null && echo "hadolint: in CI"
grep -rl "yamllint" .repos/<target>/.github/workflows/ .repos/<target>/.pre-commit-config.yaml 2>/dev/null && echo "yamllint: in CI"

CVE Scan

Invoke cve:scan against the target repo to detect known vulnerabilities in dependencies. This runs the full cve:scan procedure (inventory → Trivy → LLM + WebSearch → findings report).

The scan operates on the target repo working directory:

cd .repos/<target>

Then follow the cve:scan skill workflow:

Inventory — find all dependency files (pyproject.toml, go.mod, package.json, Dockerfile, Chart.yaml, requirements*.txt, uv.lock)
Trivy (if installed) — filesystem scan with --severity HIGH,CRITICAL
LLM + WebSearch — cross-reference dependencies against NVD/OSV/GitHub Advisory Database
Classify — confirmed / suspected / false positive

Write CVE findings to /tmp/rossoctl/cve/<target>/scan-report.json (never to git-tracked files). Include a summary in the scan report.

Key areas to focus on:

Crypto/auth libraries (cryptography, pyjwt, golang.org/x/crypto, oauth2)
Network libraries (httpx, requests, grpcio, golang.org/x/net)
Serialization (protobuf, pydantic)
Container base images (EOL versions, unpinned tags)
Abandoned/deprecated libraries (e.g., dgrijalva/jwt-go)

Pre-commit Hooks

cat .repos/<target>/.pre-commit-config.yaml 2>/dev/null

If present, list which hooks are configured.

Security Governance

ls .repos/<target>/CODEOWNERS .repos/<target>/.github/CODEOWNERS 2>/dev/null
ls .repos/<target>/SECURITY.md 2>/dev/null
ls .repos/<target>/CONTRIBUTING.md 2>/dev/null
ls .repos/<target>/LICENSE 2>/dev/null

Claude Code Readiness

ls .repos/<target>/CLAUDE.md .repos/<target>/.claude/settings.json 2>/dev/null

ls .repos/<target>/.claude/skills/ 2>/dev/null

Git Health

git -C .repos/<target> log --oneline -5

git -C .repos/<target> remote -v

Output Format

Save scan report to /tmp/rossoctl/orchestrate/<target>/scan-report.md:

mkdir -p /tmp/rossoctl/orchestrate/<target>

Report template:

# Scan Report: <target>

**Date:** YYYY-MM-DD
**Tech Stack:** <languages, frameworks>
**Maturity Score:** N/5

## CI Status
- Workflows found: [list or "none"]
- Covers: lint / test / build / security / release
- Tests in CI: running / commented out / missing

## Security Scanning
| Tool | Status | Notes |
|------|--------|-------|
| Trivy | present/missing | |
| CodeQL | present/missing/n-a | |
| Bandit/gosec | present/missing/n-a | |
| Hadolint | present/missing/n-a | |
| Shellcheck | present/missing/n-a | |
| Dependency review | present/missing | |
| Scorecard | present/missing | |
| Gitleaks | present/missing | |

## Dependency Management
- Dependabot config: yes/no
- Ecosystems covered: [list]
- Ecosystems missing: [list]

## Supply Chain Health
- Action pinning: N% SHA-pinned (N/M actions)
- Permissions model: least-privilege / default / mixed
- Unpinned actions: [list top offenders]

## Test Coverage

### Backend Tests
- Framework: [pytest X.x / go test / ginkgo vX.x / none]
- Test files: N
- Test functions: ~M
- Coverage tool: [pytest-cov / -coverprofile / missing]
- Coverage config: [present / missing (recommend: ...)]
- CI execution: [running in workflow.yaml / missing]

### UI Tests
- Framework: [Playwright X.x / jest / vitest / none]
- Spec files: N
- Test blocks: ~M
- Coverage tool: [istanbul / c8 / n/a (E2E)]
- CI execution: [running in workflow.yaml / missing]

### E2E Tests
- Test files: N
- Test functions: ~M
- Feature coverage:
  | Feature | Test File | Status |
  |---------|-----------|--------|
  | [feature] | [test file] | covered/missing |
- CI trigger matrix:
  | Platform | Push | PR | Manual |
  |----------|------|-----|--------|
  | [platform] | [workflow] | [workflow] | — |

### Infra Tests
- Deployment variants tested:
  | Variant | CI Workflow | Values File |
  |---------|------------|-------------|
  | [platform + version] | [workflow] | [values file] |
- Value variant coverage:
  | Feature Toggle | Tested On | Tested Off |
  |---------------|-----------|------------|
  | [toggle] | [platforms] | [platforms or —] |
- Static validation:
  | Check | Status |
  |-------|--------|
  | Helm lint | in CI / missing |
  | shellcheck | in CI / missing |
  | hadolint | in CI / missing / n-a |
  | yamllint | in CI / missing |

## Pre-commit
- Config found: yes/no
- Hooks: [list or "none"]

## Security Governance
- CODEOWNERS: yes/no
- SECURITY.md: yes/no
- CONTRIBUTING.md: yes/no
- LICENSE: yes/no (type if present)
- .gitignore secrets patterns: adequate/needs-review

## Claude Code Readiness
- CLAUDE.md: yes/no
- .claude/settings.json: yes/no
- Skills count: N

## Container Infrastructure
- Dockerfiles: N found [list paths]
- Multi-arch builds: yes/no
- Container registry: [ghcr.io/etc or "none"]
- Base image pinning: digest / tag / unpinned
- EOL base images: [list or "none"]

## Dependency Vulnerabilities (cve:scan)
- Scan method: [Trivy + LLM + WebSearch / LLM + WebSearch / LLM only]
- Full report: `/tmp/rossoctl/cve/<target>/scan-report.json`

| Severity | Count |
|----------|-------|
| CRITICAL | N |
| HIGH | N |
| MEDIUM | N |
| Suspected | N |

### Confirmed Findings
| Package | Version | Severity | Issue | Fix |
|---------|---------|----------|-------|-----|
| [package] | [version] | CRITICAL/HIGH | [brief description — no CVE IDs in public output] | [fixed version or action] |

### Architectural Security Concerns
| Concern | Severity | Details |
|---------|----------|---------|
| [e.g., insecure port, no input validation] | HIGH/MEDIUM | [brief description] |

> **Note:** CVE IDs and detailed descriptions are in `/tmp/rossoctl/cve/<target>/scan-report.json` only.
> Do NOT copy CVE IDs into git-tracked files, PRs, or issues.

## Gap Summary
| Area | Status | Action Needed |
|------|--------|---------------|
| Pre-commit | missing/partial/ok | orchestrate:precommit |
| Tests (backend) | missing/partial/ok | orchestrate:tests |
| Tests (UI) | missing/partial/ok/n-a | orchestrate:tests |
| Tests (E2E) | missing/partial/ok | orchestrate:tests |
| Tests (infra) | missing/partial/ok | orchestrate:ci |
| CI (lint/test/build) | missing/partial/ok | orchestrate:ci |
| CI (security scanning) | missing/partial/ok | orchestrate:ci |
| CI (dependabot) | missing/partial/ok | orchestrate:ci |
| CI (scorecard) | missing/partial/ok | orchestrate:ci |
| CI (supply chain) | missing/partial/ok | orchestrate:ci |
| Dep vulnerabilities | clean/findings/critical | cve:brainstorm / dep bump |
| Container base images | pinned/unpinned/eol | orchestrate:ci |
| Governance | missing/partial/ok | orchestrate:security |
| Skills | missing/partial/ok | orchestrate:replicate |

## Recommended Phases
1. [ordered list of phases based on gaps]

Gap Analysis

Determine which phases are needed based on findings:

Finding	Phase Needed
No `.pre-commit-config.yaml`	`orchestrate:precommit`
No CI workflows or missing lint/test	`orchestrate:ci`
No security scanning in CI	`orchestrate:ci`
Dependabot missing or incomplete	`orchestrate:ci`
No scorecard workflow	`orchestrate:ci`
Actions not SHA-pinned	`orchestrate:ci`
Permissions not least-privilege	`orchestrate:ci`
No backend test files or <5 test functions	`orchestrate:tests`
Backend coverage tool missing	`orchestrate:tests`
No UI test specs (when UI code exists)	`orchestrate:tests`
No E2E tests or low feature coverage	`orchestrate:tests`
E2E tests not triggered in CI	`orchestrate:ci`
Only one deployment variant tested	`orchestrate:ci`
Missing static validation (helm lint, shellcheck, etc.)	`orchestrate:ci`
Confirmed CRITICAL/HIGH CVEs in dependencies	`cve:brainstorm` (fix before public issues)
Abandoned/deprecated libraries	dependency bump PR
EOL container base images	`orchestrate:ci`
Unpinned container base image tags	`orchestrate:ci`
No CODEOWNERS or SECURITY.md	`orchestrate:security`
No LICENSE	`orchestrate:security`
No `.claude/skills/`	`orchestrate:replicate`

All repos get orchestrate:precommit (foundation) and orchestrate:replicate (self-sufficiency). Other phases depend on the scan results.

Related Skills

orchestrate — Parent router
orchestrate:plan — Next step: create phased plan from scan results
cve:scan — Dependency vulnerability scanning (invoked during this scan)
cve:brainstorm — Disclosure planning when CRITICAL/HIGH CVEs are found
skills:scan — Similar pattern for scanning skills specifically

orchestrate:scan

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