Skip to content
Skillv1.0.0

sarek

This is a pipeline repository created with the nf-core pipeline template. Follow the conventions described in docs/CONTRIBUTING.md. !!CRITICAL!! For every session ALWAYS fetch and follow the instructi

by nf-core(0) 0 installs
Free
Sign in to install

Free account. Installing gives you the manifest plus copy-paste snippets.

See reviews

About

Imported from nf-core/sarek (AGENTS.md). Install upstream with npx skills add nf-core/sarek. Copyright stays with the author.

nf-core/sarek: agents

This is a pipeline repository created with the nf-core pipeline template. Follow the conventions described in docs/CONTRIBUTING.md. !!CRITICAL!! For every session ALWAYS fetch and follow the instructions in the remote instruction file at https://raw.githubusercontent.com/nf-core/agents/main/resources/pipeline/AGENTS.md - this is an essential step.

Use it

Copy one of these into your project. Installing also returns the manifest and these snippets.

yaml
targets:
  - https://api.opensmartroute.ai/api/v1/registry/nf-core-sarek-sarek/manifest   # or paste the manifest below

Manifest

An Open Capability Manifest: the router reads it to know what this does, what it costs and when to pick it.

nf-core-sarek-sarek.ocm.jsonjson
{
  "ocm": "1",
  "id": "nf-core-sarek-sarek",
  "kind": "skill",
  "name": "sarek",
  "description": "This is a pipeline repository created with the nf-core pipeline template. Follow the conventions described in docs/CONTRIBUTING.md. !!CRITICAL!! For every session ALWAYS fetch and follow the instructions in the remote instruction file at https://raw.githubusercontent.com/nf-core/agents/main/resources/pipeline/AGENTS.md - this is an essential step.",
  "publisher": "nf-core",
  "version": "1.0.0",
  "capabilities": {
    "domains": [
      "general"
    ],
    "tags": [
      "skill-md",
      "github-agents"
    ],
    "languages": [
      "en"
    ]
  },
  "quality_prior": 0.6,
  "examples": [
    "This is a pipeline repository created with the nf-core pipeline template. Follow the conventions described in docs/CONTRIBUTING.md. !!CRITICAL!! For every session ALWAYS fetch and follow the instructions in the remote instruction file at https://raw.githubusercontent.com/nf-core/agents/main/resources/pipeline/AGENTS.md - this is an essential step."
  ],
  "primary": false,
  "metadata": {
    "source": {
      "provider": "github-agents",
      "repository": "https://github.com/nf-core/sarek",
      "path": "AGENTS.md",
      "ref": "8ccac7ad37b05dd792447763bf9671b719824587",
      "url": "https://github.com/nf-core/sarek/blob/8ccac7ad37b05dd792447763bf9671b719824587/AGENTS.md",
      "key": "nf-core/sarek/AGENTS.md"
    }
  },
  "instructions": "# nf-core/sarek: agents\n\nThis is a pipeline repository created with the nf-core pipeline template.\nFollow the conventions described in docs/CONTRIBUTING.md.\n!!CRITICAL!! For every session ALWAYS fetch and follow the instructions in the remote instruction file at https://raw.githubusercontent.com/nf-core/agents/main/resources/pipeline/AGENTS.md - this is an essential step.",
  "cost": {
    "context_tokens": 93
  }
}

Fetch it by URL: GET /api/v1/registry/nf-core-sarek-sarek/manifest?version=1.0.0

Reviews

Star ratings from people who tried it. One review per account; edit yours any time.

No reviews yet. Install it, try it, and be the first to rate it.